Research workbench
AlphaFold monomer V2.0 prediction for glutamate--tRNA ligase (B5RRI1)
Analyse AlphaFold monomer V2.0 prediction for glutamate--tRNA ligase (B5RRI1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5RRI1
- Type
- protein
- Length
- 506 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf409EF240fe4522BF573bd985931382e112b245C
- Molecule
- Glutamate--tRNA ligase
- UniProt
- B5RRI1
- Pockets
- 4 · best druggability 0.65
Structure
1 distinct chain · 50% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glutamate--tRNA ligase | protein | 506 | 50% helix, 11% strand | B5RRI1 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 298 | 0.65 | 0.81 | 40 | empty |
| 2 | 164 | 0.44 | 0.74 | 26 | empty |
| 3 | 112 | 0.37 | 0.74 | 29 | empty |
| 4 | 85 | 0.34 | 0.74 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5RRI1
- Elsewhere: UniProt B5RRI1 · AlphaFold DB B5RRI1
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