Research workbench
AlphaFold monomer V2.0 prediction for aspartate--tRNA ligase (Q6YR88)
Analyse AlphaFold monomer V2.0 prediction for aspartate--tRNA ligase (Q6YR88) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6YR88
- Type
- protein
- Length
- 586 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x362a6d063b1B7E1B6EfD3A9A7CA3612e3FE037AA
- Molecule
- Aspartate--tRNA ligase
- UniProt
- Q6YR88
- Pockets
- 4 · best druggability 0.81
Structure
1 distinct chain · 30% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aspartate--tRNA ligase | protein | 586 | 30% helix, 25% strand | Q6YR88 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 995 | 0.81 | 0.82 | 85 | empty |
| 2 | 55 | 0.34 | 0.78 | 15 | empty |
| 3 | 53 | 0.32 | 0.78 | 16 | empty |
| 4 | 62 | 0.27 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6YR88
- Elsewhere: UniProt Q6YR88 · AlphaFold DB Q6YR88
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