Research workbench
AlphaFold monomer V2.0 prediction for aspartate--tRNA ligase (Q8XJ28)
Analyse AlphaFold monomer V2.0 prediction for aspartate--tRNA ligase (Q8XJ28) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8XJ28
- Type
- protein
- Length
- 597 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3CF81eD02b36A740295579828dD420FdC8A79De2
- Molecule
- Aspartate--tRNA ligase
- UniProt
- Q8XJ28
- Pockets
- 4 · best druggability 0.76
Structure
1 distinct chain · 32% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aspartate--tRNA ligase | protein | 597 | 32% helix, 25% strand | Q8XJ28 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 984 | 0.76 | 0.78 | 90 | empty |
| 2 | 65 | 0.37 | 0.78 | 13 | empty |
| 3 | 53 | 0.36 | 0.79 | 14 | empty |
| 4 | 60 | 0.30 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8XJ28
- Elsewhere: UniProt Q8XJ28 · AlphaFold DB Q8XJ28
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