Research workbench
AlphaFold monomer V2.0 prediction for aspartate--tRNA ligase (A8AFH5)
Analyse AlphaFold monomer V2.0 prediction for aspartate--tRNA ligase (A8AFH5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8AFH5
- Type
- protein
- Length
- 590 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- Aspartate--tRNA ligase
- UniProt
- A8AFH5
- Pockets
- 6 · best druggability 0.74
Structure
1 distinct chain · 35% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aspartate--tRNA ligase | protein | 590 | 35% helix, 25% strand | A8AFH5 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 528 | 0.74 | 0.82 | 57 | empty |
| 2 | 467 | 0.59 | 0.74 | 42 | empty |
| 3 | 102 | 0.50 | 0.82 | 21 | empty |
| 4 | 62 | 0.37 | 0.78 | 24 | empty |
| 5 | 99 | 0.35 | 0.74 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8AFH5
- Elsewhere: UniProt A8AFH5 · AlphaFold DB A8AFH5
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