Research workbench
AlphaFold monomer V2.0 prediction for aspartate--TRNA(ASP/ASN) ligase (C5CCH2)
Analyse AlphaFold monomer V2.0 prediction for aspartate--TRNA(ASP/ASN) ligase (C5CCH2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5CCH2
- Type
- protein
- Length
- 604 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- Aspartate--TRNA(ASP/ASN) ligase
- UniProt
- C5CCH2
- Pockets
- 4 · best druggability 0.80
Structure
1 distinct chain · 30% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aspartate--TRNA(ASP/ASN) ligase | protein | 604 | 30% helix, 23% strand | C5CCH2 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 937 | 0.80 | 0.82 | 98 | empty |
| 2 | 169 | 0.44 | 0.75 | 31 | empty |
| 3 | 59 | 0.33 | 0.77 | 17 | empty |
| 4 | 57 | 0.30 | 0.75 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5CCH2
- Elsewhere: UniProt C5CCH2 · AlphaFold DB C5CCH2
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