Research workbench
AlphaFold monomer V2.0 prediction for aspartate--TRNA(ASP/ASN) ligase (A1BGZ4)
Analyse AlphaFold monomer V2.0 prediction for aspartate--TRNA(ASP/ASN) ligase (A1BGZ4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1BGZ4
- Type
- protein
- Length
- 606 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x865acfe44C28f1b23736f7fd8Da864CcBc33E693
- Molecule
- Aspartate--TRNA(ASP/ASN) ligase
- UniProt
- A1BGZ4
- Pockets
- 6 · best druggability 0.73
Structure
1 distinct chain · 31% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aspartate--TRNA(ASP/ASN) ligase | protein | 606 | 31% helix, 26% strand | A1BGZ4 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 454 | 0.73 | 0.83 | 55 | empty |
| 2 | 391 | 0.59 | 0.76 | 41 | empty |
| 3 | 233 | 0.48 | 0.74 | 30 | empty |
| 4 | 173 | 0.44 | 0.74 | 26 | empty |
| 5 | 63 | 0.32 | 0.75 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1BGZ4
- Elsewhere: UniProt A1BGZ4 · AlphaFold DB A1BGZ4
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