Research workbench
AlphaFold monomer V2.0 prediction for aspartate--TRNA(ASP/ASN) ligase (A9MAD3)
Analyse AlphaFold monomer V2.0 prediction for aspartate--TRNA(ASP/ASN) ligase (A9MAD3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A9MAD3
- Type
- protein
- Length
- 595 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1e8bBDc10263b0a8A5AB66eBFd6808b4E7635cA2
- Molecule
- Aspartate--TRNA(ASP/ASN) ligase
- UniProt
- A9MAD3
- Pockets
- 7 · best druggability 0.73
Structure
1 distinct chain · 32% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aspartate--TRNA(ASP/ASN) ligase | protein | 595 | 32% helix, 26% strand | A9MAD3 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 519 | 0.73 | 0.81 | 50 | empty |
| 2 | 124 | 0.45 | 0.77 | 19 | empty |
| 3 | 161 | 0.44 | 0.75 | 25 | empty |
| 4 | 89 | 0.43 | 0.79 | 14 | empty |
| 5 | 166 | 0.42 | 0.73 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9MAD3
- Elsewhere: UniProt A9MAD3 · AlphaFold DB A9MAD3
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