Research workbench
AlphaFold monomer V2.0 prediction for aspartate--TRNA(ASP/ASN) ligase (Q0VRK1)
Analyse AlphaFold monomer V2.0 prediction for aspartate--TRNA(ASP/ASN) ligase (Q0VRK1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0VRK1
- Type
- protein
- Length
- 587 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x69eE01C8f0EE6680BfD1adfA715C501Aba23F4B9
- Molecule
- Aspartate--TRNA(ASP/ASN) ligase
- UniProt
- Q0VRK1
- Pockets
- 4 · best druggability 0.74
Structure
1 distinct chain · 35% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aspartate--TRNA(ASP/ASN) ligase | protein | 587 | 35% helix, 26% strand | Q0VRK1 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 907 | 0.74 | 0.78 | 85 | empty |
| 2 | 89 | 0.46 | 0.80 | 25 | empty |
| 3 | 157 | 0.42 | 0.74 | 31 | empty |
| 4 | 63 | 0.35 | 0.77 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0VRK1
- Elsewhere: UniProt Q0VRK1 · AlphaFold DB Q0VRK1
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