Research workbench
AlphaFold monomer V2.0 prediction for aspartate--tRNA ligase, mitochondrial (Q3KRD0)
Analyse AlphaFold monomer V2.0 prediction for aspartate--tRNA ligase, mitochondrial… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3KRD0
- Type
- protein
- Length
- 652 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3D85cC903C71C037C7D16d11c89486F1Ee159984
- Molecule
- Aspartate--tRNA ligase, mitochondrial
- UniProt
- Q3KRD0
- Pockets
- 4 · best druggability 0.75
Structure
1 distinct chain · 31% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aspartate--tRNA ligase, mitochondrial | protein | 652 | 31% helix, 23% strand | Q3KRD0 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 710 | 0.75 | 0.80 | 95 | empty |
| 2 | 83 | 0.35 | 0.76 | 22 | empty |
| 3 | 54 | 0.35 | 0.79 | 11 | empty |
| 4 | 52 | 0.28 | 0.75 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3KRD0
- Elsewhere: UniProt Q3KRD0 · AlphaFold DB Q3KRD0
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