Research workbench
AlphaFold monomer V2.0 prediction for aspartate--tRNA ligase, cytoplasmic 2 (Q559M9)
Analyse AlphaFold monomer V2.0 prediction for aspartate--tRNA ligase, cytoplasmic 2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q559M9
- Type
- protein
- Length
- 569 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x980A8F29288e5e2E590e10bcd7a58B08E402ab91
- Molecule
- Aspartate--tRNA ligase, cytoplasmic 2
- UniProt
- Q559M9
- Pockets
- 6 · best druggability 0.78
Structure
1 distinct chain · 37% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aspartate--tRNA ligase, cytoplasmic 2 | protein | 569 | 37% helix, 23% strand | Q559M9 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 950 | 0.78 | 0.80 | 74 | empty |
| 2 | 78 | 0.49 | 0.83 | 20 | empty |
| 3 | 82 | 0.48 | 0.82 | 14 | empty |
| 4 | 155 | 0.46 | 0.76 | 25 | empty |
| 5 | 162 | 0.44 | 0.75 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q559M9
- Elsewhere: UniProt Q559M9 · AlphaFold DB Q559M9
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