Research workbench
AlphaFold monomer V2.0 prediction for cysteine--tRNA ligase (B5YPP1)
Analyse AlphaFold monomer V2.0 prediction for cysteine--tRNA ligase (B5YPP1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5YPP1
- Type
- protein
- Length
- 461 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1D13238705fb34ec8C07e3f58BEEdc523D01E2Ae
- Molecule
- Cysteine--tRNA ligase
- UniProt
- B5YPP1
- Pockets
- 3 · best druggability 0.71
Structure
1 distinct chain · 48% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cysteine--tRNA ligase | protein | 461 | 48% helix, 17% strand | B5YPP1 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 286 | 0.71 | 0.85 | 32 | empty |
| 2 | 178 | 0.43 | 0.74 | 25 | empty |
| 3 | 136 | 0.42 | 0.75 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5YPP1
- Elsewhere: UniProt B5YPP1 · AlphaFold DB B5YPP1
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