Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q9PH22)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q9PH22) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9PH22
- Type
- protein
- Length
- 884 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q9PH22
- Pockets
- 9 · best druggability 0.72
Structure
1 distinct chain · 40% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 884 | 40% helix, 27% strand | Q9PH22 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 556 | 0.72 | 0.80 | 50 | empty |
| 2 | 391 | 0.57 | 0.74 | 53 | empty |
| 3 | 224 | 0.54 | 0.77 | 34 | empty |
| 4 | 100 | 0.44 | 0.79 | 23 | empty |
| 5 | 50 | 0.39 | 0.81 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9PH22
- Elsewhere: UniProt Q9PH22 · AlphaFold DB Q9PH22
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