Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B0RTY1)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B0RTY1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0RTY1
- Type
- protein
- Length
- 882 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD0B8f00ed836787a27f2236104D09DdB625B883a
- Molecule
- Alanine--tRNA ligase
- UniProt
- B0RTY1
- Pockets
- 8 · best druggability 0.71
Structure
1 distinct chain · 41% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 882 | 41% helix, 27% strand | B0RTY1 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 585 | 0.71 | 0.80 | 63 | empty |
| 2 | 312 | 0.57 | 0.77 | 39 | empty |
| 3 | 50 | 0.57 | 0.91 | 13 | empty |
| 4 | 371 | 0.55 | 0.74 | 51 | empty |
| 5 | 124 | 0.47 | 0.78 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0RTY1
- Elsewhere: UniProt B0RTY1 · AlphaFold DB B0RTY1
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