Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q7MAD3)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q7MAD3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7MAD3
- Type
- protein
- Length
- 855 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf87a97E0A4bB354D834857B14296240B167cbe70
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q7MAD3
- Pockets
- 8 · best druggability 0.73
Structure
1 distinct chain · 40% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 855 | 40% helix, 27% strand | Q7MAD3 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 517 | 0.73 | 0.82 | 50 | empty |
| 2 | 751 | 0.68 | 0.76 | 66 | empty |
| 3 | 520 | 0.65 | 0.77 | 59 | empty |
| 4 | 176 | 0.47 | 0.76 | 31 | empty |
| 5 | 160 | 0.42 | 0.74 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7MAD3
- Elsewhere: UniProt Q7MAD3 · AlphaFold DB Q7MAD3
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