Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P61709)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P61709) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P61709
- Type
- protein
- Length
- 877 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7CCa6933a005c5dB8879819063AB1b04e6cb2856
- Molecule
- Alanine--tRNA ligase
- UniProt
- P61709
- Pockets
- 9 · best druggability 0.64
Structure
1 distinct chain · 40% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 877 | 40% helix, 27% strand | P61709 |
Pockets
9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 310 | 0.64 | 0.80 | 39 | empty |
| 2 | 370 | 0.61 | 0.77 | 33 | empty |
| 3 | 312 | 0.59 | 0.78 | 40 | empty |
| 4 | 196 | 0.57 | 0.80 | 39 | empty |
| 5 | 155 | 0.44 | 0.75 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61709
- Elsewhere: UniProt P61709 · AlphaFold DB P61709
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