Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A7MYT5)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A7MYT5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A7MYT5
- Type
- protein
- Length
- 865 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1396BAEC28486e9D3C80B83292a35ae454c0a3fa
- Molecule
- Alanine--tRNA ligase
- UniProt
- A7MYT5
- Pockets
- 7 · best druggability 0.73
Structure
1 distinct chain · 41% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 865 | 41% helix, 27% strand | A7MYT5 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 634 | 0.73 | 0.80 | 60 | empty |
| 2 | 1171 | 0.72 | 0.75 | 105 | empty |
| 3 | 96 | 0.41 | 0.77 | 22 | empty |
| 4 | 60 | 0.35 | 0.78 | 14 | empty |
| 5 | 66 | 0.34 | 0.76 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A7MYT5
- Elsewhere: UniProt A7MYT5 · AlphaFold DB A7MYT5
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