Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q3SLA9)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q3SLA9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3SLA9
- Type
- protein
- Length
- 872 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q3SLA9
- Pockets
- 10 · best druggability 0.71
Structure
1 distinct chain · 40% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 872 | 40% helix, 26% strand | Q3SLA9 |
Pockets
10 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 521 | 0.71 | 0.81 | 54 | empty |
| 2 | 331 | 0.61 | 0.78 | 35 | empty |
| 3 | 239 | 0.59 | 0.79 | 34 | empty |
| 4 | 222 | 0.54 | 0.77 | 31 | empty |
| 5 | 113 | 0.51 | 0.82 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3SLA9
- Elsewhere: UniProt Q3SLA9 · AlphaFold DB Q3SLA9
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