Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B1LBS9)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B1LBS9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1LBS9
- Type
- protein
- Length
- 863 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF8cD1d8d93E9783063700De244A6e3cf6A195579
- Molecule
- Alanine--tRNA ligase
- UniProt
- B1LBS9
- Pockets
- 8 · best druggability 0.77
Structure
1 distinct chain · 41% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 863 | 41% helix, 27% strand | B1LBS9 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1007 | 0.77 | 0.79 | 82 | empty |
| 2 | 471 | 0.65 | 0.78 | 56 | empty |
| 3 | 292 | 0.60 | 0.78 | 34 | empty |
| 4 | 59 | 0.47 | 0.84 | 14 | empty |
| 5 | 88 | 0.42 | 0.79 | 18 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1LBS9
- Elsewhere: UniProt B1LBS9 · AlphaFold DB B1LBS9
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