Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A1RWQ1)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A1RWQ1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1RWQ1
- Type
- protein
- Length
- 907 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x55f3944429C2C64Ac722744a98877eb19D370D5D
- Molecule
- Alanine--tRNA ligase
- UniProt
- A1RWQ1
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 42% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 907 | 42% helix, 23% strand | A1RWQ1 |
Pockets
5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 944 | 0.76 | 0.79 | 79 | empty |
| 2 | 579 | 0.70 | 0.79 | 62 | empty |
| 3 | 400 | 0.68 | 0.80 | 39 | empty |
| 4 | 287 | 0.57 | 0.77 | 28 | empty |
| 5 | 76 | 0.35 | 0.76 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1RWQ1
- Elsewhere: UniProt A1RWQ1 · AlphaFold DB A1RWQ1
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