Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q9HJW4)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q9HJW4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9HJW4
- Type
- protein
- Length
- 871 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xddD89F6cedc3679f21663f3046B4aB3D5161E34E
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q9HJW4
- Pockets
- 7 · best druggability 0.79
Structure
1 distinct chain · 40% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 871 | 40% helix, 24% strand | Q9HJW4 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 933 | 0.79 | 0.81 | 98 | empty |
| 2 | 361 | 0.63 | 0.79 | 28 | empty |
| 3 | 338 | 0.60 | 0.77 | 32 | empty |
| 4 | 150 | 0.44 | 0.75 | 33 | empty |
| 5 | 56 | 0.43 | 0.83 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HJW4
- Elsewhere: UniProt Q9HJW4 · AlphaFold DB Q9HJW4
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