Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P35029)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P35029) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P35029
- Type
- protein
- Length
- 907 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- Alanine--tRNA ligase
- UniProt
- P35029
- Pockets
- 6 · best druggability 0.74
Structure
1 distinct chain · 42% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 907 | 42% helix, 24% strand | P35029 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 946 | 0.74 | 0.77 | 76 | empty |
| 2 | 448 | 0.67 | 0.79 | 52 | empty |
| 3 | 296 | 0.60 | 0.78 | 44 | empty |
| 4 | 261 | 0.59 | 0.79 | 22 | empty |
| 5 | 56 | 0.33 | 0.78 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P35029
- Elsewhere: UniProt P35029 · AlphaFold DB P35029
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