Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B1W3I1)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B1W3I1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1W3I1
- Type
- protein
- Length
- 889 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xad6F273A0774F9dD08F36bf32f4127d1f502a166
- Molecule
- Alanine--tRNA ligase
- UniProt
- B1W3I1
- Pockets
- 7 · best druggability 0.73
Structure
1 distinct chain · 43% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 889 | 43% helix, 25% strand | B1W3I1 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 621 | 0.73 | 0.80 | 59 | empty |
| 2 | 543 | 0.62 | 0.75 | 65 | empty |
| 3 | 220 | 0.54 | 0.77 | 29 | empty |
| 4 | 125 | 0.40 | 0.74 | 21 | empty |
| 5 | 84 | 0.36 | 0.76 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1W3I1
- Elsewhere: UniProt B1W3I1 · AlphaFold DB B1W3I1
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