Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A5ITE3)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A5ITE3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5ITE3
- Type
- protein
- Length
- 876 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA69277C1912f2C1a1dF13BfDFDd59c0e314Da1B7
- Molecule
- Alanine--tRNA ligase
- UniProt
- A5ITE3
- Pockets
- 9 · best druggability 0.69
Structure
1 distinct chain · 42% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 876 | 42% helix, 25% strand | A5ITE3 |
Pockets
9 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 438 | 0.69 | 0.81 | 56 | empty |
| 2 | 149 | 0.49 | 0.78 | 35 | empty |
| 3 | 170 | 0.47 | 0.76 | 30 | empty |
| 4 | 142 | 0.45 | 0.76 | 23 | empty |
| 5 | 154 | 0.41 | 0.74 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5ITE3
- Elsewhere: UniProt A5ITE3 · AlphaFold DB A5ITE3
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