Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P96041)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P96041) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P96041
- Type
- protein
- Length
- 900 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEcFdC9Af6f95741e8FeAA0c9b6c43976C0126196
- Molecule
- Alanine--tRNA ligase
- UniProt
- P96041
- Pockets
- 6 · best druggability 0.72
Structure
1 distinct chain · 42% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 900 | 42% helix, 24% strand | P96041 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 830 | 0.72 | 0.77 | 70 | empty |
| 2 | 413 | 0.69 | 0.81 | 58 | empty |
| 3 | 387 | 0.62 | 0.77 | 52 | empty |
| 4 | 339 | 0.59 | 0.77 | 29 | empty |
| 5 | 150 | 0.45 | 0.76 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P96041
- Elsewhere: UniProt P96041 · AlphaFold DB P96041
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