Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A8F323)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A8F323) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8F323
- Type
- protein
- Length
- 878 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x87aD4E3aa8116A59bb2fD5A498235D57C8a4cAaA
- Molecule
- Alanine--tRNA ligase
- UniProt
- A8F323
- Pockets
- 5 · best druggability 0.78
Structure
1 distinct chain · 43% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 878 | 43% helix, 27% strand | A8F323 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1033 | 0.78 | 0.80 | 89 | empty |
| 2 | 438 | 0.68 | 0.80 | 48 | empty |
| 3 | 233 | 0.50 | 0.75 | 36 | empty |
| 4 | 68 | 0.41 | 0.80 | 13 | empty |
| 5 | 65 | 0.41 | 0.80 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8F323
- Elsewhere: UniProt A8F323 · AlphaFold DB A8F323
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