Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q07R87)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q07R87) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q07R87
- Type
- protein
- Length
- 891 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x025f3b1a898b05AD2731bE6Ab72687b5920c4A3F
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q07R87
- Pockets
- 6 · best druggability 0.78
Structure
1 distinct chain · 41% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 891 | 41% helix, 26% strand | Q07R87 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1013 | 0.78 | 0.80 | 82 | empty |
| 2 | 509 | 0.70 | 0.80 | 49 | empty |
| 3 | 86 | 0.42 | 0.79 | 16 | empty |
| 4 | 142 | 0.41 | 0.75 | 23 | empty |
| 5 | 94 | 0.38 | 0.76 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q07R87
- Elsewhere: UniProt Q07R87 · AlphaFold DB Q07R87
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