Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A4VJB3)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A4VJB3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4VJB3
- Type
- protein
- Length
- 874 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
- Molecule
- Alanine--tRNA ligase
- UniProt
- A4VJB3
- Pockets
- 6 · best druggability 0.73
Structure
1 distinct chain · 41% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 874 | 41% helix, 27% strand | A4VJB3 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1165 | 0.73 | 0.76 | 101 | empty |
| 2 | 502 | 0.72 | 0.82 | 49 | empty |
| 3 | 139 | 0.44 | 0.76 | 23 | empty |
| 4 | 63 | 0.37 | 0.79 | 15 | empty |
| 5 | 71 | 0.31 | 0.74 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4VJB3
- Elsewhere: UniProt A4VJB3 · AlphaFold DB A4VJB3
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