Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q31DD9)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q31DD9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q31DD9
- Type
- protein
- Length
- 886 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x89365364536602e20ca45Af31c26b1889b622007
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q31DD9
- Pockets
- 9 · best druggability 0.68
Structure
1 distinct chain · 44% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 886 | 44% helix, 24% strand | Q31DD9 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 501 | 0.68 | 0.79 | 55 | empty |
| 2 | 388 | 0.62 | 0.77 | 49 | empty |
| 3 | 345 | 0.61 | 0.78 | 37 | empty |
| 4 | 135 | 0.44 | 0.76 | 25 | empty |
| 5 | 106 | 0.38 | 0.75 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q31DD9
- Elsewhere: UniProt Q31DD9 · AlphaFold DB Q31DD9
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