Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A9B9E5)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A9B9E5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A9B9E5
- Type
- protein
- Length
- 890 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC9eF3D8ea0647A1f6b5E5a0D3E11fB1e8d83B01E
- Molecule
- Alanine--tRNA ligase
- UniProt
- A9B9E5
- Pockets
- 8 · best druggability 0.68
Structure
1 distinct chain · 42% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 890 | 42% helix, 25% strand | A9B9E5 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 445 | 0.68 | 0.80 | 52 | empty |
| 2 | 334 | 0.57 | 0.76 | 37 | empty |
| 3 | 249 | 0.53 | 0.76 | 36 | empty |
| 4 | 88 | 0.41 | 0.78 | 21 | empty |
| 5 | 58 | 0.39 | 0.80 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9B9E5
- Elsewhere: UniProt A9B9E5 · AlphaFold DB A9B9E5
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