Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A9BJE0)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A9BJE0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A9BJE0
- Type
- protein
- Length
- 876 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1deF5d0757faedfe2A626225e579ACe5e2e425d2
- Molecule
- Alanine--tRNA ligase
- UniProt
- A9BJE0
- Pockets
- 7 · best druggability 0.67
Structure
1 distinct chain · 42% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 876 | 42% helix, 25% strand | A9BJE0 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 454 | 0.67 | 0.79 | 51 | empty |
| 2 | 407 | 0.58 | 0.75 | 48 | empty |
| 3 | 221 | 0.54 | 0.78 | 32 | empty |
| 4 | 143 | 0.49 | 0.78 | 25 | empty |
| 5 | 58 | 0.40 | 0.81 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9BJE0
- Elsewhere: UniProt A9BJE0 · AlphaFold DB A9BJE0
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