Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q4FMX6)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q4FMX6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4FMX6
- Type
- protein
- Length
- 889 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbDA05C32aD6eE153C8C5A78dfa48d7Ba25694fea
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q4FMX6
- Pockets
- 8 · best druggability 0.70
Structure
1 distinct chain · 41% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 889 | 41% helix, 27% strand | Q4FMX6 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 711 | 0.70 | 0.77 | 70 | empty |
| 2 | 501 | 0.68 | 0.79 | 48 | empty |
| 3 | 591 | 0.65 | 0.76 | 79 | empty |
| 4 | 100 | 0.49 | 0.81 | 21 | empty |
| 5 | 72 | 0.41 | 0.80 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4FMX6
- Elsewhere: UniProt Q4FMX6 · AlphaFold DB Q4FMX6
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