Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A1T8E8)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A1T8E8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1T8E8
- Type
- protein
- Length
- 898 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
- Molecule
- Alanine--tRNA ligase
- UniProt
- A1T8E8
- Pockets
- 8 · best druggability 0.68
Structure
1 distinct chain · 44% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 898 | 44% helix, 25% strand | A1T8E8 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 515 | 0.68 | 0.79 | 68 | empty |
| 2 | 531 | 0.61 | 0.74 | 56 | empty |
| 3 | 293 | 0.60 | 0.78 | 37 | empty |
| 4 | 118 | 0.45 | 0.78 | 18 | empty |
| 5 | 153 | 0.43 | 0.75 | 33 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1T8E8
- Elsewhere: UniProt A1T8E8 · AlphaFold DB A1T8E8
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