Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q4A633)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q4A633) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4A633
- Type
- protein
- Length
- 878 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9e5E98E011361C5888c92e2CDb7652E02Bd5C7Ed
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q4A633
- Pockets
- 9 · best druggability 0.72
Structure
1 distinct chain · 39% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 878 | 39% helix, 24% strand | Q4A633 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 562 | 0.72 | 0.81 | 68 | empty |
| 2 | 330 | 0.55 | 0.75 | 33 | empty |
| 3 | 297 | 0.51 | 0.74 | 34 | empty |
| 4 | 113 | 0.47 | 0.79 | 19 | empty |
| 5 | 117 | 0.42 | 0.76 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4A633
- Elsewhere: UniProt Q4A633 · AlphaFold DB Q4A633
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