Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q6KHK5)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q6KHK5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6KHK5
- Type
- protein
- Length
- 905 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2A6FF7Aebb566d5BCA710af20271E2B0e0ccEBA8
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q6KHK5
- Pockets
- 10 · best druggability 0.69
Structure
1 distinct chain · 41% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 905 | 41% helix, 24% strand | Q6KHK5 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 496 | 0.69 | 0.80 | 57 | empty |
| 2 | 395 | 0.61 | 0.76 | 37 | empty |
| 3 | 376 | 0.59 | 0.76 | 36 | empty |
| 4 | 164 | 0.51 | 0.78 | 34 | empty |
| 5 | 193 | 0.49 | 0.76 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6KHK5
- Elsewhere: UniProt Q6KHK5 · AlphaFold DB Q6KHK5
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