Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q4AAD3)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q4AAD3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4AAD3
- Type
- protein
- Length
- 883 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8DA6C6750089f15EC3259e560D5B158356F5Ab08
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q4AAD3
- Pockets
- 11 · best druggability 0.69
Structure
1 distinct chain · 40% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 883 | 40% helix, 23% strand | Q4AAD3 |
Pockets
11 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 474 | 0.69 | 0.80 | 50 | empty |
| 2 | 366 | 0.61 | 0.77 | 40 | empty |
| 3 | 369 | 0.57 | 0.75 | 28 | empty |
| 4 | 103 | 0.56 | 0.85 | 17 | empty |
| 5 | 178 | 0.43 | 0.74 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4AAD3
- Elsewhere: UniProt Q4AAD3 · AlphaFold DB Q4AAD3
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