Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q601M2)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q601M2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q601M2
- Type
- protein
- Length
- 883 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0DC839D07bBC2D4EB1d6fD9d3D00815fD794FED2
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q601M2
- Pockets
- 11 · best druggability 0.71
Structure
1 distinct chain · 40% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 883 | 40% helix, 23% strand | Q601M2 |
Pockets
11 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 517 | 0.71 | 0.81 | 61 | empty |
| 2 | 361 | 0.61 | 0.77 | 38 | empty |
| 3 | 341 | 0.57 | 0.76 | 29 | empty |
| 4 | 96 | 0.42 | 0.78 | 20 | empty |
| 5 | 56 | 0.41 | 0.82 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q601M2
- Elsewhere: UniProt Q601M2 · AlphaFold DB Q601M2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.