Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q7NBY8)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q7NBY8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7NBY8
- Type
- protein
- Length
- 902 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3298b100681D3A2372Bba3b2f282750dD71629B9
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q7NBY8
- Pockets
- 10 · best druggability 0.70
Structure
1 distinct chain · 45% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 902 | 45% helix, 25% strand | Q7NBY8 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 496 | 0.70 | 0.80 | 56 | empty |
| 2 | 660 | 0.67 | 0.76 | 61 | empty |
| 3 | 501 | 0.66 | 0.78 | 51 | empty |
| 4 | 299 | 0.56 | 0.76 | 31 | empty |
| 5 | 90 | 0.45 | 0.80 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7NBY8
- Elsewhere: UniProt Q7NBY8 · AlphaFold DB Q7NBY8
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