Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (O27718)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (O27718) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O27718
- Type
- protein
- Length
- 898 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
- Molecule
- Alanine--tRNA ligase
- UniProt
- O27718
- Pockets
- 9 · best druggability 0.69
Structure
1 distinct chain · 44% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 898 | 44% helix, 23% strand | O27718 |
Pockets
9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 460 | 0.69 | 0.80 | 55 | empty |
| 2 | 386 | 0.62 | 0.77 | 44 | empty |
| 3 | 199 | 0.59 | 0.81 | 31 | empty |
| 4 | 271 | 0.57 | 0.78 | 29 | empty |
| 5 | 155 | 0.48 | 0.77 | 30 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O27718
- Elsewhere: UniProt O27718 · AlphaFold DB O27718
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