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AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B0UGC4)

Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B0UGC4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: B0UGC4
Type: protein
Length: 886 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x7FA92954d404a041504df5A47B6c56Cb346460FD
Molecule: Alanine--tRNA ligase
UniProt: B0UGC4
Pockets: 10 · best druggability 0.78

Structure

1 distinct chain · 42% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Alanine--tRNA ligase	protein	886	42% helix, 26% strand	B0UGC4

Pockets

10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	944	0.78	0.80	86	empty
2	477	0.70	0.80	51	empty
3	311	0.52	0.74	39	empty
4	73	0.42	0.80	17	empty
5	77	0.36	0.77	15	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B0UGC4
Elsewhere: UniProt B0UGC4 · AlphaFold DB B0UGC4

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