Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A5UKU6)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A5UKU6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5UKU6
- Type
- protein
- Length
- 897 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- Alanine--tRNA ligase
- UniProt
- A5UKU6
- Pockets
- 8 · best druggability 0.67
Structure
1 distinct chain · 44% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 897 | 44% helix, 24% strand | A5UKU6 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 465 | 0.67 | 0.79 | 59 | empty |
| 2 | 365 | 0.66 | 0.81 | 50 | empty |
| 3 | 334 | 0.59 | 0.77 | 39 | empty |
| 4 | 144 | 0.48 | 0.77 | 22 | empty |
| 5 | 95 | 0.39 | 0.76 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5UKU6
- Elsewhere: UniProt A5UKU6 · AlphaFold DB A5UKU6
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