Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A0L3J9)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A0L3J9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A0L3J9
- Type
- protein
- Length
- 878 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd91633319BDB0a92cbC4f08DeA734Bf74C030064
- Molecule
- Alanine--tRNA ligase
- UniProt
- A0L3J9
- Pockets
- 8 · best druggability 0.69
Structure
1 distinct chain · 42% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 878 | 42% helix, 27% strand | A0L3J9 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 770 | 0.69 | 0.76 | 77 | empty |
| 2 | 449 | 0.67 | 0.79 | 47 | empty |
| 3 | 92 | 0.55 | 0.85 | 20 | empty |
| 4 | 212 | 0.50 | 0.76 | 24 | empty |
| 5 | 63 | 0.40 | 0.80 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0L3J9
- Elsewhere: UniProt A0L3J9 · AlphaFold DB A0L3J9
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