Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P61703)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P61703) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P61703
- Type
- protein
- Length
- 977 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Alanine--tRNA ligase
- UniProt
- P61703
- Pockets
- 7 · best druggability 0.78
Structure
1 distinct chain · 45% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 977 | 45% helix, 24% strand | P61703 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1000 | 0.78 | 0.80 | 94 | empty |
| 2 | 1170 | 0.70 | 0.75 | 97 | empty |
| 3 | 440 | 0.69 | 0.80 | 52 | empty |
| 4 | 372 | 0.62 | 0.77 | 45 | empty |
| 5 | 103 | 0.37 | 0.75 | 19 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61703
- Elsewhere: UniProt P61703 · AlphaFold DB P61703
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