Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q5WVQ2)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q5WVQ2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5WVQ2
- Type
- protein
- Length
- 860 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q5WVQ2
- Pockets
- 8 · best druggability 0.68
Structure
1 distinct chain · 42% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 860 | 42% helix, 27% strand | Q5WVQ2 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 464 | 0.68 | 0.80 | 49 | empty |
| 2 | 284 | 0.53 | 0.75 | 32 | empty |
| 3 | 282 | 0.53 | 0.75 | 28 | empty |
| 4 | 232 | 0.52 | 0.76 | 35 | empty |
| 5 | 60 | 0.42 | 0.82 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5WVQ2
- Elsewhere: UniProt Q5WVQ2 · AlphaFold DB Q5WVQ2
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