Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P61702)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P61702) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P61702
- Type
- protein
- Length
- 882 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf868de599Ee83DBA5E1A993E4C2FC610ac38Bcff
- Molecule
- Alanine--tRNA ligase
- UniProt
- P61702
- Pockets
- 5 · best druggability 0.67
Structure
1 distinct chain · 41% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 882 | 41% helix, 25% strand | P61702 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 407 | 0.67 | 0.80 | 59 | empty |
| 2 | 303 | 0.63 | 0.80 | 38 | empty |
| 3 | 494 | 0.61 | 0.75 | 56 | empty |
| 4 | 50 | 0.40 | 0.82 | 16 | empty |
| 5 | 68 | 0.35 | 0.77 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61702
- Elsewhere: UniProt P61702 · AlphaFold DB P61702
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