Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q1IJG7)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q1IJG7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1IJG7
- Type
- protein
- Length
- 1,098 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9F605311B7e26e76340423EfAfbE5e2EFc7A0b7C
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q1IJG7
- Pockets
- 15 · best druggability 0.70
Structure
1 distinct chain · 47% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 1098 | 47% helix, 21% strand | Q1IJG7 |
Pockets
15 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 354 | 0.70 | 0.83 | 39 | empty |
| 2 | 379 | 0.69 | 0.82 | 45 | empty |
| 3 | 751 | 0.69 | 0.76 | 66 | empty |
| 4 | 340 | 0.65 | 0.80 | 40 | empty |
| 5 | 206 | 0.64 | 0.83 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1IJG7
- Elsewhere: UniProt Q1IJG7 · AlphaFold DB Q1IJG7
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