Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B2GIA1)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B2GIA1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B2GIA1
- Type
- protein
- Length
- 895 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
- Molecule
- Alanine--tRNA ligase
- UniProt
- B2GIA1
- Pockets
- 7 · best druggability 0.67
Structure
1 distinct chain · 43% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 895 | 43% helix, 26% strand | B2GIA1 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 540 | 0.67 | 0.78 | 67 | empty |
| 2 | 497 | 0.66 | 0.78 | 58 | empty |
| 3 | 275 | 0.54 | 0.76 | 33 | empty |
| 4 | 165 | 0.51 | 0.78 | 16 | empty |
| 5 | 131 | 0.39 | 0.74 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2GIA1
- Elsewhere: UniProt B2GIA1 · AlphaFold DB B2GIA1
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