Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q2SBT9)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q2SBT9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2SBT9
- Type
- protein
- Length
- 876 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q2SBT9
- Pockets
- 7 · best druggability 0.70
Structure
1 distinct chain · 40% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 876 | 40% helix, 26% strand | Q2SBT9 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 529 | 0.70 | 0.80 | 49 | empty |
| 2 | 510 | 0.63 | 0.75 | 62 | empty |
| 3 | 86 | 0.45 | 0.80 | 21 | empty |
| 4 | 127 | 0.41 | 0.75 | 21 | empty |
| 5 | 125 | 0.40 | 0.75 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2SBT9
- Elsewhere: UniProt Q2SBT9 · AlphaFold DB Q2SBT9
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