Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P43815)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P43815) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P43815
- Type
- protein
- Length
- 874 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbDA05C32aD6eE153C8C5A78dfa48d7Ba25694fea
- Molecule
- Alanine--tRNA ligase
- UniProt
- P43815
- Pockets
- 7 · best druggability 0.74
Structure
1 distinct chain · 42% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 874 | 42% helix, 27% strand | P43815 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1165 | 0.74 | 0.77 | 115 | empty |
| 2 | 479 | 0.70 | 0.81 | 47 | empty |
| 3 | 313 | 0.57 | 0.76 | 50 | empty |
| 4 | 257 | 0.52 | 0.75 | 30 | empty |
| 5 | 71 | 0.35 | 0.76 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P43815
- Elsewhere: UniProt P43815 · AlphaFold DB P43815
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