Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P61701)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (P61701) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P61701
- Type
- protein
- Length
- 875 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- Alanine--tRNA ligase
- UniProt
- P61701
- Pockets
- 10 · best druggability 0.70
Structure
1 distinct chain · 43% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 875 | 43% helix, 27% strand | P61701 |
Pockets
10 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 461 | 0.70 | 0.81 | 47 | empty |
| 2 | 794 | 0.70 | 0.76 | 74 | empty |
| 3 | 98 | 0.44 | 0.79 | 19 | empty |
| 4 | 54 | 0.42 | 0.82 | 15 | empty |
| 5 | 139 | 0.40 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61701
- Elsewhere: UniProt P61701 · AlphaFold DB P61701
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