Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q5HC27)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q5HC27) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5HC27
- Type
- protein
- Length
- 887 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x61B20aA3665705659d01e857CF16dedE7882E4F5
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q5HC27
- Pockets
- 7 · best druggability 0.69
Structure
1 distinct chain · 41% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 887 | 41% helix, 27% strand | Q5HC27 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 429 | 0.69 | 0.81 | 43 | empty |
| 2 | 216 | 0.56 | 0.79 | 40 | empty |
| 3 | 308 | 0.56 | 0.76 | 36 | empty |
| 4 | 99 | 0.44 | 0.78 | 19 | empty |
| 5 | 100 | 0.40 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5HC27
- Elsewhere: UniProt Q5HC27 · AlphaFold DB Q5HC27
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.